Only BSDDB plugin needs bsddb3; back/restore moved to db

This commit is contained in:
Doug Blank 2015-05-12 22:03:10 -04:00
parent 2d6a319c13
commit e7d62cf9b1
22 changed files with 239 additions and 257 deletions

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@ -137,57 +137,8 @@ class CLIDbManager(object):
current DB. current DB.
Returns ("Unknown", "Unknown", "Unknown") if invalid DB or other error. Returns ("Unknown", "Unknown", "Unknown") if invalid DB or other error.
""" """
from bsddb3 import dbshelve, db ## Maybe return the txt file contents, for now
return ("Unknown", "Unknown", "Unknown")
from gramps.gen.db import META, PERSON_TBL
from gramps.gen.db.dbconst import BDBVERSFN
bdbversion_file = os.path.join(dirpath, BDBVERSFN)
if os.path.isfile(bdbversion_file):
vers_file = open(bdbversion_file)
bsddb_version = vers_file.readline().strip()
else:
return "Unknown", "Unknown", "Unknown"
current_bsddb_version = str(db.version())
if bsddb_version != current_bsddb_version:
return "Unknown", bsddb_version, "Unknown"
env = db.DBEnv()
flags = db.DB_CREATE | db.DB_PRIVATE |\
db.DB_INIT_MPOOL |\
db.DB_INIT_LOG | db.DB_INIT_TXN
try:
env.open(dirpath, flags)
except Exception as msg:
LOG.warning("Error opening db environment for '%s': %s" %
(name, str(msg)))
try:
env.close()
except Exception as msg:
LOG.warning("Error closing db environment for '%s': %s" %
(name, str(msg)))
return "Unknown", bsddb_version, "Unknown"
dbmap1 = dbshelve.DBShelf(env)
fname = os.path.join(dirpath, META + ".db")
try:
dbmap1.open(fname, META, db.DB_HASH, db.DB_RDONLY)
except:
env.close()
return "Unknown", bsddb_version, "Unknown"
schema_version = dbmap1.get(b'version', default=None)
dbmap1.close()
dbmap2 = dbshelve.DBShelf(env)
fname = os.path.join(dirpath, PERSON_TBL + ".db")
try:
dbmap2.open(fname, PERSON_TBL, db.DB_HASH, db.DB_RDONLY)
except:
env.close()
return "Unknown", bsddb_version, schema_version
count = len(dbmap2)
dbmap2.close()
env.close()
return (count, bsddb_version, schema_version)
def family_tree_summary(self): def family_tree_summary(self):
""" """

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@ -86,11 +86,5 @@ More details can be found in the manual's
from .base import * from .base import *
from .dbconst import * from .dbconst import *
#from .cursor import *
#from .read import *
#from .bsddbtxn import *
from .txn import * from .txn import *
#from .undoredo import *
from .exceptions import * from .exceptions import *
#from .write import *
#from .backup import backup, restore

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@ -1,8 +0,0 @@
import logging
LOG = logging.getLogger(".Backup")
def backup(database):
print("FIXME")
def restore(database):
print("FIXME")

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@ -31,8 +31,7 @@ Declare constants used by database modules
__all__ = ( __all__ = (
('DBPAGE', 'DBMODE', 'DBCACHE', 'DBLOCKS', 'DBOBJECTS', 'DBUNDO', ('DBPAGE', 'DBMODE', 'DBCACHE', 'DBLOCKS', 'DBOBJECTS', 'DBUNDO',
'DBEXT', 'DBMODE_R', 'DBMODE_W', 'DBUNDOFN', 'DBLOCKFN', 'DBEXT', 'DBMODE_R', 'DBMODE_W', 'DBUNDOFN', 'DBLOCKFN',
'DBRECOVFN','BDBVERSFN', 'DBLOGNAME', 'DBFLAGS_O', 'DBFLAGS_R', 'DBRECOVFN','BDBVERSFN', 'DBLOGNAME', 'SCHVERSFN', 'PCKVERSFN'
'DBFLAGS_D', 'SCHVERSFN', 'PCKVERSFN'
) + ) +
('PERSON_KEY', 'FAMILY_KEY', 'SOURCE_KEY', 'CITATION_KEY', ('PERSON_KEY', 'FAMILY_KEY', 'SOURCE_KEY', 'CITATION_KEY',
@ -60,18 +59,6 @@ DBLOCKS = 100000 # Maximum number of locks supported
DBOBJECTS = 100000 # Maximum number of simultaneously locked objects DBOBJECTS = 100000 # Maximum number of simultaneously locked objects
DBUNDO = 1000 # Maximum size of undo buffer DBUNDO = 1000 # Maximum size of undo buffer
try:
from bsddb3.db import DB_CREATE, DB_AUTO_COMMIT, DB_DUP, DB_DUPSORT, DB_RDONLY
DBFLAGS_O = DB_CREATE | DB_AUTO_COMMIT # Default flags for database open
DBFLAGS_R = DB_RDONLY # Flags to open a database read-only
DBFLAGS_D = DB_DUP | DB_DUPSORT # Default flags for duplicate keys
except:
print("WARNING: no bsddb support")
# FIXME: make this more abstract to deal with other backends, or do not import
DBFLAGS_O = DB_CREATE = DB_AUTO_COMMIT = 0
DBFLAGS_R = DB_RDONLY = 0
DBFLAGS_D = DB_DUP = DB_DUPSORT = 0
PERSON_KEY = 0 PERSON_KEY = 0
FAMILY_KEY = 1 FAMILY_KEY = 1
SOURCE_KEY = 2 SOURCE_KEY = 2

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@ -320,8 +320,6 @@ class Gramplet(object):
self._idle_id = 0 self._idle_id = 0
LOG.debug("gramplet updater: %s : One time, done!" % self.gui.title) LOG.debug("gramplet updater: %s : One time, done!" % self.gui.title)
return False return False
# FIXME: find out why Data Entry has this error, or just ignore it
import bsddb3 as bsddb
try: try:
retval = next(self._generator) retval = next(self._generator)
if not retval: if not retval:
@ -332,10 +330,6 @@ class Gramplet(object):
LOG.debug("gramplet updater: %s: return %s" % LOG.debug("gramplet updater: %s: return %s" %
(self.gui.title, retval)) (self.gui.title, retval))
return retval return retval
except bsddb.db.DBCursorClosedError:
# not sure why---caused by Data Entry Gramplet
LOG.warn("bsddb.db.DBCursorClosedError in: %s" % self.gui.title)
return False
except StopIteration: except StopIteration:
self._idle_id = 0 self._idle_id = 0
self._generator.close() self._generator.close()

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@ -136,14 +136,6 @@ if not sys.version_info >= MIN_PYTHON_VERSION :
'v3': MIN_PYTHON_VERSION[2]}) 'v3': MIN_PYTHON_VERSION[2]})
sys.exit(1) sys.exit(1)
try:
import bsddb3
except ImportError:
logging.warning(_("\nYou don't have the python3 bsddb3 package installed."
" This package is needed to start Gramps.\n\n"
"Gramps will terminate now."))
sys.exit(1)
#------------------------------------------------------------------------- #-------------------------------------------------------------------------
# #
# Gramps libraries # Gramps libraries

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@ -28,7 +28,12 @@
import os import os
import sys import sys
import io import io
import bsddb3 as bsddb
try:
import bsddb3 as bsddb ## ok, in try/except
BSDDB_STR = ellipses(str(bsddb.__version__) + " " + str(bsddb.db.version()))
except:
BSDDB_STR = 'not found'
##import logging ##import logging
##_LOG = logging.getLogger(".GrampsAboutDialog") ##_LOG = logging.getLogger(".GrampsAboutDialog")
@ -125,7 +130,7 @@ class GrampsAboutDialog(Gtk.AboutDialog):
"Distribution: %s") "Distribution: %s")
% (ellipses(str(VERSION)), % (ellipses(str(VERSION)),
ellipses(str(sys.version).replace('\n','')), ellipses(str(sys.version).replace('\n','')),
ellipses(str(bsddb.__version__) + " " + str(bsddb.db.version())), BSDDB_STR,
ellipses(get_env_var('LANG','')), ellipses(get_env_var('LANG','')),
ellipses(operatingsystem), ellipses(operatingsystem),
ellipses(distribution))) ellipses(distribution)))

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@ -78,7 +78,6 @@ from gramps.cli.clidbman import CLIDbManager, NAME_FILE, time_val
from .ddtargets import DdTargets from .ddtargets import DdTargets
from gramps.gen.recentfiles import rename_filename, remove_filename from gramps.gen.recentfiles import rename_filename, remove_filename
from .glade import Glade from .glade import Glade
from gramps.gen.db.backup import restore
from gramps.gen.db.exceptions import DbException from gramps.gen.db.exceptions import DbException
@ -728,7 +727,7 @@ class DbManager(CLIDbManager):
self.__start_cursor(_("Rebuilding database from backup files")) self.__start_cursor(_("Rebuilding database from backup files"))
try: try:
restore(dbase) dbase.restore()
except DbException as msg: except DbException as msg:
DbManager.ERROR(_("Error restoring backup data"), msg) DbManager.ERROR(_("Error restoring backup data"), msg)

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@ -26,7 +26,6 @@
# python modules # python modules
# #
#------------------------------------------------------------------------- #-------------------------------------------------------------------------
from bsddb3 import db as bsddb_db
import pickle import pickle
#------------------------------------------------------------------------- #-------------------------------------------------------------------------
@ -1026,10 +1025,11 @@ class EditFamily(EditPrimary):
) )
def save(self, *obj): def save(self, *obj):
try: ## FIXME: how to catch a specific error?
self.__do_save() #try:
except bsddb_db.DBRunRecoveryError as msg: self.__do_save()
RunDatabaseRepair(msg[1]) #except bsddb_db.DBRunRecoveryError as msg:
# RunDatabaseRepair(msg[1])
def __do_save(self): def __do_save(self):
self.ok_button.set_sensitive(False) self.ok_button.set_sensitive(False)

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@ -30,7 +30,12 @@ from gi.repository import GdkPixbuf
from gi.repository import GObject from gi.repository import GObject
import cairo import cairo
import sys, os import sys, os
import bsddb3 as bsddb
try:
import bsddb3 as bsddb # ok, in try/except
BSDDB_STR = str(bsddb.__version__) + " " + str(bsddb.db.version())
except:
BSDDB_STR = 'not found'
#------------------------------------------------------------------------- #-------------------------------------------------------------------------
# #
@ -166,7 +171,7 @@ class ErrorReportAssistant(Gtk.Assistant):
"gobject version: %s\n"\ "gobject version: %s\n"\
"cairo version : %s"\ "cairo version : %s"\
% (str(sys.version).replace('\n',''), % (str(sys.version).replace('\n',''),
str(bsddb.__version__) + " " + str(bsddb.db.version()), BSDDB_STR,
str(VERSION), str(VERSION),
get_env_var('LANG',''), get_env_var('LANG',''),
operatingsystem, operatingsystem,

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@ -87,7 +87,6 @@ from gramps.gen.utils.file import media_path_full
from .dbloader import DbLoader from .dbloader import DbLoader
from .display import display_help, display_url from .display import display_help, display_url
from .configure import GrampsPreferences from .configure import GrampsPreferences
from gramps.gen.db.backup import backup
from gramps.gen.db.exceptions import DbException from gramps.gen.db.exceptions import DbException
from .aboutdialog import GrampsAboutDialog from .aboutdialog import GrampsAboutDialog
from .navigator import Navigator from .navigator import Navigator
@ -762,7 +761,7 @@ class ViewManager(CLIManager):
self.uistate.progress.show() self.uistate.progress.show()
self.uistate.push_message(self.dbstate, _("Autobackup...")) self.uistate.push_message(self.dbstate, _("Autobackup..."))
try: try:
backup(self.dbstate.db) self.dbstate.db.backup()
except DbException as msg: except DbException as msg:
ErrorDialog(_("Error saving backup data"), msg) ErrorDialog(_("Error saving backup data"), msg)
self.uistate.set_busy_cursor(False) self.uistate.set_busy_cursor(False)

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@ -93,4 +93,3 @@ from gramps.gen.db.txn import *
from .undoredo import * from .undoredo import *
from gramps.gen.db.exceptions import * from gramps.gen.db.exceptions import *
from .write import * from .write import *
from .backup import backup, restore

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@ -72,142 +72,3 @@ from .write import FAMILY_TBL, PLACES_TBL, SOURCES_TBL, MEDIA_TBL, \
import logging import logging
LOG = logging.getLogger(".Backup") LOG = logging.getLogger(".Backup")
def backup(database):
"""
Exports the database to a set of backup files. These files consist
of the pickled database tables, one file for each table.
The heavy lifting is done by the private :py:func:`__do__export` function.
The purpose of this function is to catch any exceptions that occur.
:param database: database instance to backup
:type database: DbDir
"""
try:
__do_export(database)
except (OSError, IOError) as msg:
raise DbException(str(msg))
def __mk_backup_name(database, base):
"""
Return the backup name of the database table
:param database: database instance
:type database: DbDir
:param base: base name of the table
:type base: str
"""
return os.path.join(database.get_save_path(), base + ".gbkp")
def __mk_tmp_name(database, base):
"""
Return the temporary backup name of the database table
:param database: database instance
:type database: DbDir
:param base: base name of the table
:type base: str
"""
return os.path.join(database.get_save_path(), base + ".gbkp.new")
def __do_export(database):
"""
Loop through each table of the database, saving the pickled data
a file.
:param database: database instance to backup
:type database: DbDir
"""
try:
for (base, tbl) in __build_tbl_map(database):
backup_name = __mk_tmp_name(database, base)
backup_table = open(backup_name, 'wb')
cursor = tbl.cursor()
data = cursor.first()
while data:
pickle.dump(data, backup_table, 2)
data = cursor.next()
cursor.close()
backup_table.close()
except (IOError,OSError):
return
for (base, tbl) in __build_tbl_map(database):
new_name = __mk_backup_name(database, base)
old_name = __mk_tmp_name(database, base)
if os.path.isfile(new_name):
os.unlink(new_name)
os.rename(old_name, new_name)
def restore(database):
"""
Restores the database to a set of backup files. These files consist
of the pickled database tables, one file for each table.
The heavy lifting is done by the private :py:func:`__do__restore` function.
The purpose of this function is to catch any exceptions that occur.
:param database: database instance to restore
:type database: DbDir
"""
try:
__do_restore(database)
except (OSError, IOError) as msg:
raise DbException(str(msg))
def __do_restore(database):
"""
Loop through each table of the database, restoring the pickled data
to the appropriate database file.
:param database: database instance to backup
:type database: DbDir
"""
for (base, tbl) in __build_tbl_map(database):
backup_name = __mk_backup_name(database, base)
backup_table = open(backup_name, 'rb')
__load_tbl_txn(database, backup_table, tbl)
database.rebuild_secondary()
def __load_tbl_txn(database, backup_table, tbl):
"""
Return the temporary backup name of the database table
:param database: database instance
:type database: DbDir
:param backup_table: file containing the backup data
:type backup_table: file
:param tbl: Berkeley db database table
:type tbl: Berkeley db database table
"""
try:
while True:
data = pickle.load(backup_table)
txn = database.env.txn_begin()
tbl.put(data[0], data[1], txn=txn)
txn.commit()
except EOFError:
backup_table.close()
def __build_tbl_map(database):
"""
Builds a table map of names to database tables.
:param database: database instance to backup
:type database: DbDir
"""
return [
( PERSON_TBL, database.person_map.db),
( FAMILY_TBL, database.family_map.db),
( PLACES_TBL, database.place_map.db),
( SOURCES_TBL, database.source_map.db),
( CITATIONS_TBL, database.citation_map.db),
( REPO_TBL, database.repository_map.db),
( NOTE_TBL, database.note_map.db),
( MEDIA_TBL, database.media_map.db),
( EVENTS_TBL, database.event_map.db),
( TAG_TBL, database.tag_map.db),
( META, database.metadata.db),
]

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@ -0,0 +1,62 @@
## Removed from clidbman.py
## specific to bsddb
from bsddb3 import dbshelve, db
import os
from gramps.gen.db import META, PERSON_TBL
from gramps.gen.db.dbconst import BDBVERSFN
def get_dbdir_summary(dirpath, name):
"""
Returns (people_count, bsddb_version, schema_version) of
current DB.
Returns ("Unknown", "Unknown", "Unknown") if invalid DB or other error.
"""
bdbversion_file = os.path.join(dirpath, BDBVERSFN)
if os.path.isfile(bdbversion_file):
vers_file = open(bdbversion_file)
bsddb_version = vers_file.readline().strip()
else:
return "Unknown", "Unknown", "Unknown"
current_bsddb_version = str(db.version())
if bsddb_version != current_bsddb_version:
return "Unknown", bsddb_version, "Unknown"
env = db.DBEnv()
flags = db.DB_CREATE | db.DB_PRIVATE |\
db.DB_INIT_MPOOL |\
db.DB_INIT_LOG | db.DB_INIT_TXN
try:
env.open(dirpath, flags)
except Exception as msg:
LOG.warning("Error opening db environment for '%s': %s" %
(name, str(msg)))
try:
env.close()
except Exception as msg:
LOG.warning("Error closing db environment for '%s': %s" %
(name, str(msg)))
return "Unknown", bsddb_version, "Unknown"
dbmap1 = dbshelve.DBShelf(env)
fname = os.path.join(dirpath, META + ".db")
try:
dbmap1.open(fname, META, db.DB_HASH, db.DB_RDONLY)
except:
env.close()
return "Unknown", bsddb_version, "Unknown"
schema_version = dbmap1.get(b'version', default=None)
dbmap1.close()
dbmap2 = dbshelve.DBShelf(env)
fname = os.path.join(dirpath, PERSON_TBL + ".db")
try:
dbmap2.open(fname, PERSON_TBL, db.DB_HASH, db.DB_RDONLY)
except:
env.close()
return "Unknown", bsddb_version, schema_version
count = len(dbmap2)
dbmap2.close()
env.close()
return (count, bsddb_version, schema_version)

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@ -40,16 +40,12 @@ from functools import wraps
import logging import logging
from sys import maxsize, getfilesystemencoding, version_info from sys import maxsize, getfilesystemencoding, version_info
try: from bsddb3 import dbshelve, db
from bsddb3 import dbshelve, db from bsddb3.db import DB_CREATE, DB_AUTO_COMMIT, DB_DUP, DB_DUPSORT, DB_RDONLY
except:
# FIXME: make this more abstract to deal with other backends DBFLAGS_O = DB_CREATE | DB_AUTO_COMMIT # Default flags for database open
class db: DBFLAGS_R = DB_RDONLY # Flags to open a database read-only
DB_HASH = 0 DBFLAGS_D = DB_DUP | DB_DUPSORT # Default flags for duplicate keys
DBRunRecoveryError = 0
DBAccessError = 0
DBPageNotFoundError = 0
DBInvalidArgError = 0
#------------------------------------------------------------------------- #-------------------------------------------------------------------------
# #
@ -2450,6 +2446,146 @@ class DbBsddb(DbBsddbRead, DbWriteBase, UpdateCallback):
""" """
return DbTxn return DbTxn
def backup(self):
"""
Exports the database to a set of backup files. These files consist
of the pickled database tables, one file for each table.
The heavy lifting is done by the private :py:func:`__do__export` function.
The purpose of this function is to catch any exceptions that occur.
:param database: database instance to backup
:type database: DbDir
"""
try:
do_export(self)
except (OSError, IOError) as msg:
raise DbException(str(msg))
def restore(self):
"""
Restores the database to a set of backup files. These files consist
of the pickled database tables, one file for each table.
The heavy lifting is done by the private :py:func:`__do__restore` function.
The purpose of this function is to catch any exceptions that occur.
:param database: database instance to restore
:type database: DbDir
"""
try:
do_restore(self)
except (OSError, IOError) as msg:
raise DbException(str(msg))
def mk_backup_name(database, base):
"""
Return the backup name of the database table
:param database: database instance
:type database: DbDir
:param base: base name of the table
:type base: str
"""
return os.path.join(database.get_save_path(), base + ".gbkp")
def mk_tmp_name(database, base):
"""
Return the temporary backup name of the database table
:param database: database instance
:type database: DbDir
:param base: base name of the table
:type base: str
"""
return os.path.join(database.get_save_path(), base + ".gbkp.new")
def do_export(database):
"""
Loop through each table of the database, saving the pickled data
a file.
:param database: database instance to backup
:type database: DbDir
"""
try:
for (base, tbl) in build_tbl_map(database):
backup_name = mk_tmp_name(database, base)
backup_table = open(backup_name, 'wb')
cursor = tbl.cursor()
data = cursor.first()
while data:
pickle.dump(data, backup_table, 2)
data = cursor.next()
cursor.close()
backup_table.close()
except (IOError,OSError):
return
for (base, tbl) in build_tbl_map(database):
new_name = mk_backup_name(database, base)
old_name = mk_tmp_name(database, base)
if os.path.isfile(new_name):
os.unlink(new_name)
os.rename(old_name, new_name)
def do_restore(database):
"""
Loop through each table of the database, restoring the pickled data
to the appropriate database file.
:param database: database instance to backup
:type database: DbDir
"""
for (base, tbl) in build_tbl_map(database):
backup_name = mk_backup_name(database, base)
backup_table = open(backup_name, 'rb')
load_tbl_txn(database, backup_table, tbl)
database.rebuild_secondary()
def load_tbl_txn(database, backup_table, tbl):
"""
Return the temporary backup name of the database table
:param database: database instance
:type database: DbDir
:param backup_table: file containing the backup data
:type backup_table: file
:param tbl: Berkeley db database table
:type tbl: Berkeley db database table
"""
try:
while True:
data = pickle.load(backup_table)
txn = database.env.txn_begin()
tbl.put(data[0], data[1], txn=txn)
txn.commit()
except EOFError:
backup_table.close()
def build_tbl_map(database):
"""
Builds a table map of names to database tables.
:param database: database instance to backup
:type database: DbDir
"""
return [
( PERSON_TBL, database.person_map.db),
( FAMILY_TBL, database.family_map.db),
( PLACES_TBL, database.place_map.db),
( SOURCES_TBL, database.source_map.db),
( CITATIONS_TBL, database.citation_map.db),
( REPO_TBL, database.repository_map.db),
( NOTE_TBL, database.note_map.db),
( MEDIA_TBL, database.media_map.db),
( EVENTS_TBL, database.event_map.db),
( TAG_TBL, database.tag_map.db),
( META, database.metadata.db),
]
def _mkname(path, name): def _mkname(path, name):
return os.path.join(path, name + DBEXT) return os.path.join(path, name + DBEXT)

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@ -31,7 +31,6 @@ Show uncollected objects in a window.
#------------------------------------------------------------------------ #------------------------------------------------------------------------
from gramps.gen.const import GRAMPS_LOCALE as glocale from gramps.gen.const import GRAMPS_LOCALE as glocale
_ = glocale.translation.gettext _ = glocale.translation.gettext
from bsddb3.db import DBError
#------------------------------------------------------------------------ #------------------------------------------------------------------------
# #
@ -155,6 +154,13 @@ class Leak(Gramplet):
parent=self.uistate.window) parent=self.uistate.window)
def display(self): def display(self):
try:
from bsddb3.db import DBError
except:
class DBError(Exception):
"""
Dummy.
"""
gc.collect(2) gc.collect(2)
self.model.clear() self.model.clear()
count = 0 count = 0